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Hartwig Medical Foundation
The Hartwig Medical Foundation sequences the whole genomes of Dutch cancer patients' tumours through participating hospitals and pools the data for research, one of the largest such programmes anywhere.
Overview
Founded in 2015 in Amsterdam, the Hartwig Medical Foundation runs whole-genome sequencing of tumours for patients referred through participating Dutch hospitals and maintains a national database of tumour genomes with clinical data that researchers worldwide can apply to use. Its stated aim is improved cancer patient care driven by data. Access is by referral in the Netherlands.
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technologies
Open-source projects
All open source in oncology →Open-source projects that this organisation maintains, from OnCo's own catalogue: licence and last activity as the repository reported them on the day of the fetch. Listing is not endorsement; check the licence before reuse and the validation before clinical use.
- Hartwig hmftools (PURPLE, GRIDSS, LINX, SAGE)GPL-3.0Open code, closed dataAnalysis pipelines & modelling
The Hartwig Medical Foundation's whole-genome cancer analysis suite: purity and ploidy (PURPLE), structural variants (GRIDSS, LINX), point mutations (SAGE) and reporting, run on thousands of Dutch tumours.